Package: CHOIRBM 0.0.3

CHOIRBM: Plots the CHOIR Body Map

Collection of utility functions for visualizing body map data collected with the Collaborative Health Outcomes Information Registry.

Authors:Eric Cramer [aut, cre], Stanford University School of Medicine [cph, fnd]

CHOIRBM_0.0.3.tar.gz
CHOIRBM_0.0.3.zip(r-4.7-any)CHOIRBM_0.0.3.zip(r-4.6-any)CHOIRBM_0.0.3.zip(r-4.5-any)
CHOIRBM_0.0.3.tgz(r-4.6-any)CHOIRBM_0.0.3.tgz(r-4.5-any)
CHOIRBM_0.0.3.tar.gz(r-4.7-any)CHOIRBM_0.0.3.tar.gz(r-4.6-any)
CHOIRBM_0.0.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
CHOIRBM/json (API)

# Install 'CHOIRBM' in R:
install.packages('CHOIRBM', repos = c('https://emcramer.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/emcramer/choirbm/issues

Datasets:
  • validation - CHOIR Body Map data for approximately 7,000 patients

On CRAN:

Conda:

body-mapcbmchoirdata-visualizationvisualization

5.98 score 9 stars 42 scripts 397 downloads 15 exports 31 dependencies

Last updated from:662e89b801. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK140
source / vignettesOK256
linux-releaseOK149
macos-releaseOK163
macos-oldrelOK168
windows-develOK90
windows-releaseOK93
windows-oldrelOK82
wasm-releaseOK122

Exports:agg_choirbm_listcomp_choirbm_chicomp_choirbm_glmcomp_choirbm_ztestcomp_cooccurrenceconvert_bodymapconvert_bodymapsgen_example_datanum_areasplot_cooccurrenceplot_female_choirbmplot_male_choirbmplot_nareas_histogramprep_bodymapsstring_to_map

Dependencies:backportsbroomclicpp11dplyrfarvergenericsggplot2gluegtableisobandlabelinglifecyclemagrittrpillarpkgconfigpurrrR6RColorBrewerrlangS7scalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr

Calculate the co-occurrence between different locations on the CHOIR Body Map
Defining "co-occurrence" | Workflow
Rendered fromcalc-cooccurrence.Rmdusingknitr::rmarkdown

Last update: 2021-08-27
Started: 2021-08-27

Analyzing and comparing CHOIR Body Maps
Analyzing CBMs | Example 1: Chi-Squared method | Data processing | Compare the percent endorsements | Example 2: z-test method | Example 3: Logistic regression method
Rendered fromcompare-choirbms.Rmdusingknitr::rmarkdown

Last update: 2021-08-27
Started: 2021-02-16

Convert CBMs to Standard
Rendered fromconvert_bodymaps.Rmdusingknitr::rmarkdown

Last update: 2021-08-27
Started: 2021-08-27

Processing data from a CHOIR database from start to finish
Data processing | Plotting
Rendered fromchoir-db-ex.Rmdusingknitr::rmarkdown

Last update: 2021-03-04
Started: 2021-02-13

Plotting a single patient's CBM
Converting a string map into a CBM-plot-ready data frame
Rendered fromplot-one-patient.Rmdusingknitr::rmarkdown

Last update: 2021-03-04
Started: 2021-02-02